240039 Plant Genomics

Detaljer
Inst. for Jordbrugsvidenskab   45 %
Inst. for Plantebiologi   45 %
Inst. for Basal Husdyr- og Veterinærvidenskab   10 %
Tidligst mulig placeringBachelor 3. år
VarighedEn blok
 
Pointværdi7.5 (ECTS)
KursustypeFælleskursus
Status as common course provides flexibility and possibility for participation from various study directions
 
EksamenSluteksamen

skriftlig prøve


Skriftlig auditorieeksamen

Alle hjælpemidler tilladt

Beskrivelse af eksamen: Four hours written exam based on a number of questions covering most aspects of the course.

Vægtning: 100 %



13-skala, intern censur

Eksamensdatoer:
03 November 2006
 
Forudsætninger for indstilling til eksamenAccepted lab reports(75 %) and oral presentation of case
 
Rammer for undervisningMixture of lectures, laboratory and computer exercises and PBL cases.
 
BlokplaceringBlock 1
Ugestruktur: A
 
UndervisningssprogEngelsk
 
Anbefalede forudsætningerAfter Organism Biology and after Bioinformatics 1 or similar prerequisites for outsite KVL students
 
Kompetenceområder
Basic science:
Comprehension of integrated approaches using genetics, physiology, biochemistry and bioinformatics to relate plant phenotype with genotype as platforms for molecular models of plant metabolism.

Integration of basic plant knowledge to understand complex plant model systems.

Applied science:
Knowledge of application of molecular tools for plant improvement through molecular breeding for agricultural plant production, biomedicine and plants as green factories.

Knowledge of basic laboratory technicques within plant genomics and molecular breeding.

Ethics and values:
Is aware of the ethics of exploitation of new molecular approaches in plant biotechnology.
 
Kursets målsætning
Provide a basic knowledge about the structure of plant genomes and experience with major techniques used within basic science and molecular breeding. Focus is on closing the gap between phenotypic traits and the increasing information on plant genomes and RNA/DNA/protein sequences. The course initiates from genomics of the two model species rice and Arabidopsis and transfers the principles to cultivated crops to understand the potential of exploitations of the technology.
 
Kursusindhold
Forward and reverse genetics.
Mutants: based on TILLING/T-DNA/transposon/spontaneous.
Genome sequencing programmes - why the choice of model organisms.
Genetic diversity of plants.
Phylogenetic trees, pedigrees and dendrograms based on molecular markers and gene sequences.
The structure of plant genomes.
Molecular marker based maps and linkage analysis.
Quantitative traits and their genetics (QTL).
Comparative mapping of plant genomes and exploitation of synteni.
Functional genomics.
Plant in vitro cultures and plant regeneration.
Expression profiling (arrays).
Integrative genomics.
 
Undervisningsform
40 % for lectures and discussion classes. 60 % for practical exercises and advice of PBL cases. Students are expected to work in dynamic groups for exercises and PBL and be able to produce short hand written and oral presentation of results.
 
Litteraturhenvisninger
unknown at present
 
Kursusansvarlig
Sven Bode Andersen, sba@life.ku.dk, Institut for Jordbrugsvidenskab/Plante- og Jordvidenskab, Tlf: 35333444
Søren Bak, bak@life.ku.dk, Institut for Plantebiologi og Bioteknologi/Plantebiokemisk Laboratorium, Tlf: 35333346
 
Studienævn
Studienævn NSN
 
Kursusbeskrivelsesomfang
forelæsninger20
teoretiske øvelser20
praktiske øvelser65
eksamen4
forberedelse97

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